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All-optical interrogation of neural circuits in behaving mice

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Russell LE. et al, (2021)

In search of common developmental and evolutionary origin of the claustrum and subplate.

Journal article

Bruguier H. et al, (2020), J Comp Neurol, 528, 2956 - 2977

How many neurons are sufficient for perception of cortical activity?

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Dalgleish HW. et al, (2020), Elife, 9

Closed-loop all-optical interrogation of neural circuits in vivo.

Journal article

Zhang Z. et al, (2018), Nat Methods, 15, 1037 - 1040

Model-based Bayesian inference of neural activity and connectivity from all-optical interrogation of a neural circuit

Conference paper

Aitchison L. et al, (2017), Advances in Neural Information Processing Systems, 2017-December, 3487 - 3496

Axo-dendritic overlap and laminar projection can explain interneuron connectivity to pyramidal cells.

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Packer AM. et al, (2013), Cereb Cortex, 23, 2790 - 2802

Targeting neurons and photons for optogenetics.

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Packer AM. et al, (2013), Nat Neurosci, 16, 805 - 815

The logic of inhibitory connectivity in the neocortex.

Journal article

Fino E. et al, (2013), Neuroscientist, 19, 228 - 237

Extracting regions of interest from biological images with convolutional sparse block coding

Conference paper

Pachitariu M. et al, (2013), Advances in Neural Information Processing Systems

Inferring neural population dynamics from multiple partial recordings of the same neural circuit

Conference paper

Turaga SC. et al, (2013), Advances in Neural Information Processing Systems

Two-photon optogenetic toolbox for fast inhibition, excitation and bistable modulation.

Journal article

Prakash R. et al, (2012), Nat Methods, 9, 1171 - 1179

Two-photon optogenetics of dendritic spines and neural circuits.

Journal article

Packer AM. et al, (2012), Nat Methods, 9, 1202 - 1205

Dense, unspecific connectivity of neocortical parvalbumin-positive interneurons: a canonical microcircuit for inhibition?

Journal article

Packer AM. and Yuste R., (2011), J Neurosci, 31, 13260 - 13271

Designing optimal stimuli to control neuronal spike timing.

Journal article

Ahmadian Y. et al, (2011), J Neurophysiol, 106, 1038 - 1053

Fast nonnegative deconvolution for spike train inference from population calcium imaging.

Journal article

Vogelstein JT. et al, (2010), J Neurophysiol, 104, 3691 - 3704

A neural circuit for angular velocity computation.

Journal article

Snider SB. et al, (2010), Front Neural Circuits, 4

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