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ACover: Methods BJGG Jan 2014 CECR
DBio Essay Dec 2011 EJGG No9 FBio Essay Mar 2011

 

 

2016

Liu JL. (2016). The cytoophidium and its kind: Filamentation and compartmentation of metabolic enzymes. Annual Review of Cell and Developmental Biology, 32 [ABSTRACT] [in press]

Aughey GN and Liu JL. (2016). Metabolic regulation via enzyme filamentation. Critical Reviews in Biochemistry and Molecular Biology, DOI:10.3109/10409238.2016.1172555 [HTML] [PDF]

Shen QJ*, Kassim H*, Huang Y*, Li H*, Zhang J, Li G, Wang PY, Yan J, Ye FF and Liu JL. (2016). Filamentation of metabolic enzymes in Saccharomyces cerevisiae. Journal of Genetics and Genomics 43 [Epub on 1 April 2016]. (*These authors contributed equally to this work) [HTML]

Aughey GN, Grice SJ and Liu JL. (2016). The interplay between MYC and CTP synthase in Drosophila. PLOS Genetics 12(2):e1005867. [HTML] [PDF] [SUPPLEMENTARY DATA]

Ghosh S, Tibbit C and Liu JL. (2016). Effective knockdown of Drosophila long non-coding RNAs by CRISPR interference. Nucleic Acids Research 44 [Epub on 4 Feb 2016].[HTML][PDF][SUPPLEMENTARY DATA]

2015

Chang CC, Lin WC, Pai LM, Lee HS, Wu SC, Ding ST, Liu JL* and Sung LY*. (2015). Cytoophidium assembly reflects upregulation of IMPDH activity. Journal of Cell Science 129(19):3550-5. (*Corresponding authors). [HTML] [PDF] [SUPPLEMENTARY DATA] [Cover]

Grice SJ and Liu JL. (2015). A SteMNess perspective of survival motor neuron function: Splicing factors in stem cell biology and disease. Frontier in Biology 10(4):297-309. [Cover ].

Tastan OY and Liu JL. (2015). Visualising the Drosophila Ovary via Immunohistochemistry. In: McNeil G and Bratu D (eds) Methods in Molecular Biology Series. Drosophila Oogenesis: Methods and Protocols. Springer 1328:179-89. doi: 10.1007/978-1-4939-2851-4_13.

Nizami Z, Liu JL and Gall JG. (2015). Fluorescent In Situ Hybridization of Nuclear Bodies in Drosophila melanogaster Ovaries. In: McNeil G and Bratu D (eds) Methods in Molecular Biology Series. Drosophila Oogenesis: Methods and Protocols. Springer 1328:137-49. doi: 10.1007/978-1-4939-2851-4_10.

Grice SJ, Sleigh JN, Motley WW, Liu JL, Burgess RW, Talbot K, Cader MZ.(2015). Dominant, toxic gain-of-function mutations in gars lead to non-cell autonomous neuropathology. Human Molecular Genetics (Epub 13/5/15) [HTML][PDF]

Bassett AR, Kong L and Liu JL. (2015). A genome-wide CRISPR library for high-throughput genetic screening in Drosophila cells. Journal of Genetics and Genomics (Epub 18/4/2015) [HTML][PDF]

Liu JL. (2015). May the force be with you: Metabolism of arginine and pyrimidines. Journal of Genetics and Genomics 42(5):179-80. [HTML][PDF]

Tastan OY and Liu JL. (2015). CTP synthase is required for optic lope homeostasis in Drosophila. Journal of Genetics and Genomics 42(5):261-74. [HTML][PDF][Cover].

Grice SJ, Liu JL and Webber C. (2015). Synergistic interactions between Drosophila orthologues of genes spanned by de novo human CNVs support multiple-hit models of autism. PLOS Genetics 11(3):e1004998. [HTML][PDF]

Chang WF, Xu J, Chang CC, Yang SH, Li HY, Hsieh-Li HM, Tsai MH, Wu SC, Cheng WTK, Liu JL* and Sung LY*. (2015). SMN is required for the maintenance of embryonic stem cells and neuronal differentiation in mice. Brain Structure & Function 220(3):1539-53. [HTML][PDF]

2014

Zhang J, Hulme L and Liu JL. (2014). Asymmetric inheritance of cytoophidia in Schizosaccharomyces pombe. Biology Open  3:1092-7.[HTML][PDF][PDF+Supp Mat]

Aughey GN*, Grice SJ*, Shen QJ*, Xu Y, Chang CC, Azzam G, Wang PY, Freeman-Mills M, Pai LM, Sung LY, Yan J and Liu JL. (2014). Nucleotide synthesis is regulated by cytoophidium formation during neurodevelopment and adaptive metabolism. Biology Open [Epub 17 Oct 2014] [HTML][PDF][PDF+Supp Mat] (*These authors contributed equally to this work).

Aughey GN*, Tastan ÖY* and Liu JL. (2014). Cellular serpents and dreaming spires: new frontiers in arginine and pyrimidine biology. Journal of Genetics and Genomics 41(10):561-5. [HTML][PDF] (*These authors contributed equally to this work).

Bassett AR, Azzam G, Wheatley L, Tibbit C, Rajakumar T, McGowan S, Stanger N, Ewels PA, Taylor S, Ponting CP, Liu JL, Sauka-Spengler T and Fulga TA. (2014). Understanding functional miRNA-target interactions in vivo by site-specific genome engineering. Nature Communications 5:4640.

Bassett AR and Liu JL. (2014). CRISPR/Cas9 mediated genome engineering in Drosophila. Methods 69:128-136. [Epub ahead of print 24 Feb 2014] [http://dx.doi.org/10.1016/j.ymeth.2014.02.019][PDF][Cover: A][OXfCRISPR]

Gou KM*, Chang CC*, Shen QJ, Sung LY** and Liu JL**. (2014). CTP synthase forms cytoophidia in the cytoplasm and nucleus. Experimental Cell Research 323(1):242-253. [doi:10.1016/j.yexcr.2014.01.029] (*These authors contributed equally to this work; **Corresponding authors).

Davies SE, Hallett PJ, Moen T, Smith G, Mangano E, Kim HT, Goldberg AL, Liu JL, Isacson O, Tofaris GK. (2014). Enhanced ubiquitin-dependent degradation by Nedd4 portects against α-synuclein accumulation and toxicity in animal models of Parkinson's disease. Neurobiology of Disease 64C:79-87. [doi:10.1016/j.nbd.2013.12.011]

Bassett AR and Liu JL. (2014). CRISPR/Cas9 and genome editing in Drosophila. Journal of Genetics and Genomics 41(1):7-19. [doi:10.1016/j.jgg.2013.12.004][POSTER:Timeline of CRISPR Research][Cover: B][OXfCRISPR]

Bassett AR*, Tibbit C, Ponting CP and Liu JL*. (2014). Mutagenesis and homologous recombination in Drosophila cell lines using CRISPR/Cas9. Biology Open 3(1):42-9. (*Corresponding authors). [doi: 10.1242/bio.20137120][PDF][PDF + Supp Mat][OXfCRISPR]

2013

Bassett AR*, Tibbit C, Ponting CP and Liu JL*. (2013). Highly efficient targeted mutagenesis of Drosophila with the CRISPR/Cas9 system. Cell Reports 4(1):220-8 [Published 1 July 2013]. (*Corresponding authors). [http://dx.doi.org/10.1016/j.celrep.2013.06.020] [PDF][OXfCRISPR][Cell Reports Best of 2013]

Smibert P*, Yang JS*, Azzam G*, Liu JL** and Lai EC**. (2013). Homeostatic control of Argonaute stability by microRNA availability. Nature Structural & Molecular Biology 20(7):789-95. [Epub 26 May 2013]. (*These authors contributed equally to this work; **Corresponding authors). [doi:10.1038/nsmb.2606] [PDF]

Grice SJ*, Praveen K*, Matera AG** and Liu JL**. (2013). Spinal muscular Atrophy: Insights from the fruit fly. In: Drosophila Models of Motor Neuron Disease. Cauchi R (ed.). Nova Publishers, New York, USA. pp171-84. (*These authors contributed equally to this work; **Corresponding authors).

Azzam G and Liu JL. (2013). Only one isoform of Drosophila melanogaster CTP synthase forms the cytoophidium. PLOS Genetics 9(2): e1003256. [doi:10.1371/journal.pgen.1003256] [PDF] [XML][Cell Picture Show]

2012

Liu JL and Gall JG. (2012). Induction of human lampbrush chromosomes. Chromosome Research 20(8):971-978. [Abstract][HTML][PDF].

Azzam G, Smibert P, Lai EC and Liu JL. (2012). Drosophila Argonaute 1 and its miRNA biogenesis partners are required for oocyte formation and germline cell division. Developmental Biology 365(2):384-394.[HTML][PDF][Cover: C]

Young RS, Marques AC*, Tibbit C*, Haerty W, Bassett AR, Liu JL** and Ponting CP**. (2012). Identification and Properties of 1,119 candidate lincRNA loci in the Drosophila melanogaster Genome. Genome Biology and Evolution 4(4):427-442. (*These authors contributed equally to this work; **Corresponding authors). [HTML][PDF].

2011

Grice SJ*, Sleigh JN*, Liu JL** and Sattelle DB**. (2011). Invertebrate models of spinal muscular atrophy: insights into mechanisms and potential therapeutics. BioEssays 33(12):956-65. (*These authors contributed equally to this work; **Corresponding authors). [doi: 10.1002/bies.201100082][HTML][PDF][Cover: E]

Buckingham M and Liu JL. (2011). U bodies respond to nutrient stress in Drosophila. Experimental Cell Research 317(20):2835-44. [doi:10.1016/j.yexcr.2011.09.001][PDF][Cover: D]

Chen K*, Zhang J*, Tastan ÖY*, Deussen ZA, Siswick MY and Liu JL. (2011). Glutamine analogs promote cytoophidium assembly in human and Drosophila cells. Journal of Genetics and Genomics 38(9):391-402. (*These authors contributed equally to this work). [doi:10.1016/j.jgg.2011.08.004][PDF][Cover: F][Oxford Science Blog][Cell Picture Show]

Grice SJ and Liu JL. (2011). Survival motor neuron protein regulates stem cell division, proliferation and differentiation in Drosophila. PLOS Genetics 7(4): e1002030. [doi:10.1371/journal.pgen.1002030][PDF][XML]

Liu JL. (2011). The enigmatic cytoophidium: compartmentation of CTP synthase via filament formation. BioEssays 33(3):159-64. [HTML][PDF][Cover]

2010

Liu JL. (2010). Intracellular compartmentation of CTP synthase in Drosophila. Journal of Genetics and Genomics 37(5):281-96. [HTML][PDF][Supplementary material][NATURE | News Feature]

Cauchi RJ, Sanchez-Pulido L and Liu JL. (2010). Drosophila SMN complex proteins Gemin2, Gemin3, and Gemin5 are components of U bodies. Experimental Cell Research 316:2354-64. [HTML][PDF]

2009

Lee L, Davies SE and Liu JL. (2009). The spinal muscular atrophy protein SMN affects Drosophila germline nuclear organization through the U body-P body pathway. Developmental Biology 332(1):142-55. [HTML][PDF]

Liu JL, Wu Z, Nizami Z, Deryusheva S, Rajendra TK, Beumer KJ, Gao H, Matera AG, Carroll D and Gall JG. (2009). Coilin is essential for Cajal body organization in Drosophila melanogaster. Molecular Biology of the Cell 20(6):1661-70. [HTML][PDF][F1000 Recommended]

2008

Beumer KJ, Trautman JK, Bozas A, Liu JL, Rutter J, Gall JG and Carroll D. (2008). Efficient gene targeting in Drosophila by direct embryo injection with Zinc-finger nucleases. Proceedings of the National Academy of Sciences of the United States of America 105(50):19821-6. [HTML][PDF]

Cauchi RJ, Davies KE and Liu JL. (2008). A Motor Function for the DEAD-Box RNA Helicase, Gemin3, in Drosophila. PLOS Genetics 4(11):e1000265. [doi:10.1371/journal.pgen.1000265][PDF] [XML]

2007

Liu JL and Gall JG. (2007). U bodies are cytoplasmic structures that contain uridine-rich small nuclear ribonucleoproteins and associate with P bodies. Proceedings of the National Academy of Sciences of the United States of America 104(28):11655-9. [HTML][PDF]

Pre-2007, representative

Liu JL, Buszczak M and Gall JG. (2006). Nuclear bodies in the Drosophila geminal vesicle. Chromosome Research 14(4):465-75. [HTML][PDF]

Liu JL, Murphy C, Buszczak M, Clatterbuck S, Goodman R and Gall JG. (2006). The Drosophila melanogaster Cajal body. Journal of Cell Biology 172(6):875-84. [HTML][PDF][Comment in: Matera AG. (2006). Drosophila Cajal bodies: accessories not included. Journal of Cell Biology 172(6):791-3][F1000 Must Read]

Liu JL, Kusakabe H, Chang CC, Suzuki H, Schmidt DW, Julian M, Pfeffer R, Bormann CL, Tian XC, Yanagimachi R and Yang X. (2004). Freeze-dried sperm fertilization leads to full-term development in rabbits. Biology of Reproduction 70(6):1776-81. [HTML][PDF][CTV][EurekAlert!][Honolulu Star-Bulletin][ScienceDaily][UPI]